Publications

(in reverse chronological order)
A.  Book Chapters

7. Dindar, N., Tekalp, M., Basdogan, C., 2014, “Dynamic Haptic Interaction with Video”, Handbook of Virtual Environments: Design, Implementation, and Applications, Second Edition (Human Factors and Ergonomics), Ed: K.S. Hale, K.M. Stanney, pp. 115-130, Publisher: CRC Press.

6. Basdogan, C., 2012, “Dynamic Material Properties of Human and Animal Livers“, Soft Tissue Biomechanical Modeling for Computer Assisted Surgery, Springer Series on Studies in Mechanobiology, Tissue Engineering, and Biomaterials, Vol. 11, pp. 229-241, Ed: P. Yohan.

5. Kucukyilmaz, A., Oguz, S.O., Sezgin, M., Basdogan, C., 2012, “Improving Human-Computer Cooperation Through Haptic Role Exchange and Negotiation“, Immersive Multimodal Interactive Presence, Springer Series on Touch and Haptic Systems, Part 2, pp. 229-254, Eds: A. Peer and C. D. Giachritsis.

4. Basdogan, C., Loftin B., “Multimodal Display Systems: Haptic, Olfactory, Gustatory, and Vestibular”, The Handbook of Virtual Environments for Training and Education, Eds: D. Schmorrow, J. Cohn, D. Nicholson, pp. 116-135, Publisher: Greenwood Publishing. 

3. Basdogan, C., Laycock, S.D.  Day, A.M., Patoglu, V., Gillespie, R.B., 2007, “3-Dof Haptic Rendering”, Haptic Rendering, Eds: M.C. Lin and M. Otaduy, pp. 311-333, Publisher: A.K. Peters.

2. Basdogan, C.,  Srinivasan, M.A., 2001, “Haptic Rendering In Virtual Environments” ,Virtual Environments HandBook, Ed: K.M. Stanney, pp. 117-134, Publisher:Lawrence Erlbaum Associates.

1. Srinivasan, M. A, Basdogan, C., Ho, C., 1999, Haptic Interactions in the Real and Virtual Worlds, Design, Specification and Verification of Interactive Systems’99,Eds: D. Duke and D. Duce, Springer-Verlag Wien.

B. Journals

38. Vardar, Y., Güçlü, B., Basdogan, C., 2017, “Effect of Waveform on Tactile Perception by Electrovibration Displayed on Touch Screens, IEEE Transactions on Haptics, Issue 99.

38. Arasan, A., Basdogan, C., Sezgin, T.M., 2016, “HaptiStylus; A Novel Stylus Capable of Displaying Movement and Rotational Torque Effects”, IEEE Computer Graphics and Applications, Vol. 36, No. 1, pp. 30-41. See the supplementary material: video1 (9849K).

37. Ayyildiz, M., Cinoglu, S., Basdogan, C., 2015, “Effect of Normal Compression on the Shear Modulus of Soft Tissue in Rheological Measurements, Journal of the Mechanical Behavior of Biomedical Materials, Vol. 49, pp. 235-243.

36. Madan, C.E.; Kucukyilmaz, A.; Sezgin, T.M.; Basdogan, C., 2015, “Recognition of Haptic Interaction Patterns in Dyadic Joint Object Manipulation“, IEEE Transactions on Haptics, Vol.8, no.1, pp.54,66. doi: 10.1109/TOH.2014.2384049 [ Bibtex ].

35. Ayyildiz, M., Aktas, R.G., Basdogan, C., 2014, “Effect of Solution and Post-Mortem Time on Mechanical and Histological Properties of Liver During Cold Preservation”, Biorheology, Vol. 51, No.1, pp. 47-70.

34. Yarpuzlu, B., Ayyildiz, M., Tok, O.E., Aktas, R.G., Basdogan, C., 2014, “Correlation between the Mechanical and Histological Properties of Liver Tissue”, Journal of the Mechanical Behavior of Biomedical Materials, vol. 29, pp. 403-416.

33. Ayyildiz, M., Guclu, B., Yildiz, M.Z., Basdogan, C., 2013, “An Opto-Electro-Mechanical Tactile Sensor for Detection of Breast Lumps“, IEEE Transactions on Haptics, Vol. 6, No. 2, pp. 145-155.

32. Kucukyilmaz, A.; Sezgin, T.M.; Basdogan, C., 2013, “Intention Recognition for Dynamic Role Exchange in Haptic Collaboration,”IEEE Transactions on Haptics, vol.6, no.1, pp.58,68.

31. Mortl, A., Lawitzky, M., Kucukyilmaz, A., Sezgin, M., Basdogan, C., Hirche, S., 2012, “The Role of Roles: Physical Cooperation between Humans and Robots“, International Journal of Robotics Research, Vol. 31, No. 13, pp. 1656-1674. See the supplementary material: video (11183K)

30. Oguz, S.O., Kucukyilmaz, A., Sezgin, T.M., Basdogan, C., 2012, “Supporting Negotiation Behavior with Haptics-Enabled Human-Computer Interfaces“, IEEE Transactions on Haptics, Vol. 5, No. 3, pp. 274-284.

29. Gokgol, C., Basdogan, C., Canadinc, D., 2012, “Estimation of Fracture Toughness of Liver Tissue: Experiments and Validation”, Medical Engineering and Physics, Vol. 34, No. 7, pp. 882-891.

28. Necipoglu, S., Cebeci, S., Basdogan, C., Has, Y., Guvenc, L., 2011, “Repetitive Control of an XYZ Piezo-stage for Faster Nano-scanning: Numerical Simulations and Experiments”, Mechatronics, Vol. 21, No.6, pp. 1098-1107.

27. Necipoglu, S., Cebeci, S., Has, Y., Guvenc, L., Basdogan, C., 2011, “Robust Repetitive Controller for Fast AFM Imaging”, IEEE Transactions on Nanotechnology, Vol. 10, No.5, pp. 1074-1082

26. Ozcan, M. U., Ocal, S., Basdogan, C., Dogusoy, G., Tokat, Y., 2011, Characterization of Frequency-Dependent Material Properties of Human Liver and its Pathologies Using an Impact Hammer,Medical Image Analysis, Vol. 15, No.1, pp. 45-52.

25. Ocal, S., Ozcan, M. U., Basdogan, I., Basdogan, C., 2010, Effect of Preservation Period on the Viscoelastic Material Properties of Soft Tissues with Implications for Liver TransplantationJournal of Biomechanical EngineeringASME Transactions, Vol. 132, No.10, 101007 (7 pages).

24. Peterlik, I., Sedef, M., Basdogan, C., Matyska, L., 2010, “Real-time Visio-Haptic Interaction with Static Soft Tissue Models Having Geometric and Material Nonlinearity”, Computers and Graphics, Vol. 34, No.1, pp. 43-54.  See the supplementary material: video01 (1521K), video02 (11882K), video03 (1252K).

23. Orun, B., Necipoglu, S., Basdogan, C., Guvenc, L., 2009, “State Feedback Control for Adjusting the Dynamic Behavior of a Piezoactuated Bimorph Atomic Force Microscopy Probe”, Review of Scientific Instruments, Vol. 80, No.6, 063701.

22. Yannier, N., Basdogan, C., Tasiran, S., Sen, O.L., 2009, “Using Haptics to Convey Cause and Effect Relations in Climate Visualization”, IEEE Transactions on Haptics, Vol. 1, No. 2, pp. 130-141. Our work appeared in NewScientist magazine (Wheather map interface lets you feel the wind), several internet-based news portals around the world, a local newspaper (Hürriyet, March 07, 2008) and a TV Channel (NTV-MSNBC).

21. Bukusoglu, I., Basdogan, C., Kiraz, A., Kurt, A., 2008, “Haptic Manipulation of Microspheres Using Optical Tweezers Under the Guidance of Artificial Force Fields”,Presence: Teleoperators and Virtual Environments, MIT Pres, Vol. 17, No. 4, pp. 344-364.

20. Oztireli, A.C., Basdogan, C., 2008, “A New Feature-Based Method for Robust and Efficient Rigid-Body Registration of Overlapping Point Clouds”, Visual Computer, Springer-Verlag, Vol. 24, pp. 679-688.

19. Varol, A., Gunev, I., Orun, B., Basdogan, C., 2008, “Numerical Simulation of Nano Scanning in Intermittent-Contact Mode AFM under Q control”, Nanotechnology, 19, 075503.

18. Subasi, E., Basdogan, C., 2008, “A New Haptic Interaction and Visualization Approach for Rigid Molecular Docking in Virtual Environments“, Presence:Teleoperators and Virtual Environments, MIT Press, Vol. 17, No.1, pp. 73-90.

17. Basdogan, C., Kiraz, A., Bukusoglu, I., Varol, A., Doganay, S., 2007, “Haptic Guidance for Improved Task Performance in Steering Microparticles with Optical Tweezers”, Optics Express, Vol. 15, No. 18, pp. 11616-11621.

16. Samur, E., Sedef, M., Basdogan, C., Avtan, L., Duzgun, O., 2007, “A Robotic Indenter for Minimally Invasive Measurement and Characterization of Soft Tissue Behavior”, Medical Image Analysis, Vol. 11, No.4, pp. 361-373.

15. Gunev, I., Varol, A., Karaman, S., Basdogan, C., 2007, “Adaptive Q control for Tapping-mode Nano-scanning Using a Piezo-actuated Bimorph Probe”Review of Scientific Instruments, Vol. 78, No.4, 043707.

14. Basdogan, C., Sedef, M., Harders, M., Wesarg, S., 2007, “Virtual Reality Supported Simulators for Training in Minimally Invasive Surgery” (invited paper), IEEE Computer Graphics and Applications, Vol. 27, No.2, pp. 54-66.

13. Basdogan, C., 2007, “From 2D images to 3D Tangible Models: Autostereoscopic and Haptic Visualization of Martian Rocks in Virtual Environments”, Presence:Teleoperators and Virtual Environments, MIT Press, Vol. 16, No. 1, pp. 1-15. We made the cover page of the journal, this article is listed in the top 25 most-downloaded articles for the journal.

12. Sedef, M., Samur, E., Basdogan, C., 2006, “Real-time Finite-Element Simulation of Linear Viscoelastic Tissue Behavior Based on Experimental Data”, IEEE Computer Graphics and Applications, Vol. 26, No. 5, pp. 58-68.

11. Basdogan, C., De, S., Kim, J., Muniyandi, M., Srinivasan, M.A., 2004, “Haptics in Minimally Invasive Surgical Simulation and Training”, IEEE  Computer Graphics and Applications, Vol. 24, No. 2, pp. 56-64.
10. Basdogan, C., Ho, C., Srinivasan, M.A., 2001, “Virtual Environments for Medical Training: Graphical and Haptic Simulation of Laparoscopic Common Bile Duct Exploration”, IEEE/ASME Transactions on Mechatronics, Vol. 6, No. 3, pp. 267-285. (corrections for the printing errors in the article)

9. Ho, C., Basdogan, C., Srinivasan, M.A., 1999, “Ray-Based Haptic Rendering: Force and Torque Interactions between a Line Probe and 3D Objects in Virtual Environments“, International Journal of Robotics Research, Vol. 19, No. 7, pp. 668-684.

8. Basdogan, C., Ho, C., Srinivasan, M.A., Slater, M., 2000, “An Experimental Study on the Role of Touch in Shared Virtual Environments“, ACM Human Computer Interactions, Vol. 7, no. 4, pp. 440-463.

7. Ho, C., Basdogan, C., Srinivasan, M.A., 1999, “Efficient Point-Based Rendering Techniques for Haptic Display of Virtual Objects”, Presence: Teleoperators and Virtual Environments, MIT Pres, Vol. 8, No. 5, pp. 477-491.

6. Srinivasan, M.A., Basdogan, C., 1997, “Haptics in Virtual Environments: Taxonomy, Research Status, and Challenges”, Computers and Graphics, (Best Paper Award 1997 of the journal), Vol. 21, No. 4, pp. 393-404.

5. Delp S.L., Loan J.P., Basdogan C., Rosen J.M., 1997, “Surgical Simulation: An Emerging Technology for Training in Emergency Medicine” Presence: Teleoperatorsand Virtual Environments, MIT Press, Vol. 6, No. 4, pp. 147-159.

4. McDonald P.V., Basdogan C., Bloomberg J.J., Layne C.S., 1996, “Lower Limb Kinematics During Treadmill Walking After Space Flight: Implications for Gaze Stabilization“, Experimental Brain Research, Vol. 112, pp. 325-334.

3. Hurmuzlu Y., Basdogan C., Stoianovici D., 1996, “Kinematics and Dynamics Stability of the Locomotion of Post-Polio Patients“, Journal of Biomechanical Engineering, ASME Transactions, Vol. 118, pp. 405-411.

2. Hurmuzlu Y., Basdogan C., 1994, “On  the Measurement of Dynamic Stability of Human Locomotion“, Journal of Biomechanical Engineering, ASME Transactions, Vol. 116, pp. 30-36.

1. Hurmuzlu Y., Basdogan C., Carollo J., 1994, “Presenting Joint Kinematics of Human Locomotion Using Phase Plane Portraits and Poincare Maps“, Journal of Biomechanics, Vol. 27, No. 12, pp. 1495-1499.

C. Conference Proceedings

37. Vardar, Y., Isleyen, A., Saleem, M.K., Basdogan, C., “Roughness Perception of Virtual Textures Displayed by Electrovibration on Touch Screens”, Proceedings of IEEE World Haptics Conference (WHC), Munich, June 6-9, 2017, pp. 263–268.

36. Aydin, Y., Tokatli, O., Patoglu, V., Basdogan, C., “Fractional Order Admittance Control for Physical Human-Robot Interaction”, Proceedings of IEEE World Haptics Conference (WHC), Munich, June 6-9, 2017, pp. 257-262.

35. Saleem, M.K., Yilmaz, C., Basdogan, C., “Tactile Perception of Change in Friction on an Ultrasonically Actuated Glass Surface”, Proceedings of IEEE World Haptics Conference (WHC), Munich, June 6-9, 2017, pp. 495-500.

34. Guzererler, A., Provancher, W.R., Basdogan, C., 2016, “Perception of Skin Stretch Applied to Palm: Effects of Speed and Displacement“, In Haptics: Perception, Devices, Control, and Applications: 10th International Conference, EuroHaptics 2016, London, UK, July 4-7, 2016, Proceedings, Part I, 2016, pp. 180-189.

33. Vardar, Y., Güçlü, B., Basdogan, C., 2016, “Effect of Waveform in Haptic Perception of Electrovibration on Touchscreens“, In Haptics: Perception, Devices, Control, and Applications: 10th International Conference, EuroHaptics 2016, London, UK, July 4-7, 2016, Proceedings, Part I, 2016, pp. 190-203.

32. Aydın, Y., Arghavani, N., Basdogan, C., 2014, “A New Control Architecture for Physical Human-Robot Interaction Based on Haptic Communication”, Proceedings of the 2014 ACM/IEEE International Conference on Human-Robot Interaction, March 3–6, Bielefeld, Germany, pp. 122-123.

31. Arasan, A., Basdogan, C., Sezgin, T.M., 2013, “Haptic Stylus with Inertial and Vibrotactile Feedback”, Proceedings of IEEE World Haptics Conference, April 14-18, Daejeon, pp. 425-430.

30. Baylan, B., Aridogan, U., Basdogan, C., 2012, “Finite Element Modeling of a Vibrating Touch Screen Actuated by Piezo Patches for Haptic Feedback”, Proceedings of EuroHaptics Conference, June 12-15, Tampere, pp. 47-57, (LNCS 7282).

29. Ege, E.S., Cetin, F., Basdogan, C., 2011, Vibrotactile Feedback in Steering Wheel Reduces Navigation Errors during GPS-Guided Car Driving, Proceedings of IEEE World Haptics Conference, June 21-24, Istanbul, pp. 345-348. Our work appeared in NewScientist magazine June 2011, Vibrating steering wheels tells you when to turn.

28. Kucukyilmaz, A., Sezgin, T.M., Basdogan, C., 2011, Conveying Intentions Through Haptics in Human-Computer Collaboration, Proceedings of IEEE World Haptics Conference, June 21-24, Istanbul, pp. 421-426.

27. Baran, B.B., Basdogan, C., 2010, Force-Based Calibration of a Particle System for Realistic Simulation of Nonlinear and Viscoelastic Soft Tissue Behavior, Proceedings of EuroHaptics, July 8-10, Amsterdam, LNCS 6191, pp. 23-28.

26. Ayyildiz, M., Guclu, B., Yildiz, M.Z., Basdogan, C., 2010, A Novel Tactile Sensor for Detecting Lumps in Breast Tissue, Proceedings of EuroHaptics, July 8-10, Amsterdam, LNCS 6191, pp. 367-372.

25. Dindar, N., Tekalp, M., Basdogan, C., 2010, Immersive Haptic Interaction with Media, Proc. SPIE, Vol. 7744, 77440M (7 pages), doi:10.1117/12.863387, Visual Communications and Image Processing, July 11-14, Huangshan, China.

24. Oguz, S.O.Kucukyilmaz, A.Sezgin, T.M.Basdogan, C., 2010, Haptic Negotiation and Role Exchange for Collaboration in Virtual Environments, Proceedings of IEEE Symposium on Haptics, March 25-26, Waltham, MA, pp. 371-378.

23. Sedef, M., Samur, E., Basdogan, C., 2006. Visual and Haptic Simulation of Linear Viscoelastic Tissue Behavior Based on Experimental Data, Proceedings of the IEEE Symposium on Haptic Interfaces for Virtual Environments and Teleoperator Systems, pp. 201-208, March 25-27, Washington D.C (nominated for the best paper award).

22. Subasi, E., Basdogan, C. (2006). A New Approach to Molecular Docking in Virtual Environments with Haptic Feedback. Proceedings of EuroHaptics Conference, pp. 141-145, July 3-6, Paris.

21. Varol, A., Gunev, I., Basdogan, C., 2006. A Virtual Reality Toolkit for Path Planning and Manipulation at Nano-Scale, Proceedings of the IEEE Symposium on Haptic Interfaces for Virtual Environments and Teleoperator Systems, pp. 485-489, March 25-27, Washington D.C.

20. Bukusoglu, I., Basdogan, C., Kiraz, A., Kurt, A., 2006. Haptic Manipulation of Microspheres with Optical Tweezers, Proceedings of the IEEE Symposium on Haptic Interfaces for Virtual Environments and Teleoperator Systems, pp. 361-365, March 25-27, Washington D.C.

19. Samur, E., Sedef, M., Basdogan, C., Avtan, L., Duzgun, O., 2005. A Robotic Indenter for Minimally Invasive Characterization of Soft Tissues. Proceedings of the International Conference on Computer Assisted Radiology and Surgery, Vol. 1281 , pp. 713-718, June, Berlin.

18. Basdogan C., Lum, M., Salcedo, J., Chow, E., Kupiec, S., Kostrzewski, A., 2002, Autostereoscopic and Haptic Visualization for Space Exploration and Mission Design, IEEE Virtual Reality Conference, pp. 271-276,   Orlando, FL.

17. Basdogan, C., Bergman, L., 2001, Multi-modal Shared Virtual Environments for Robust Remote Manipulation with Collaborative Rovers, Proceedings of Touch in Virtual Environments Workshop, USC, Los Angeles, CA.

16. Basdogan, C., 2001, Real-time Simulation of Dynamically Deformable Finite Element Models Using Modal Analysis and Spectral Lanczos Decomposition Methods, Proceedings of the Medicine Meets Virtual Reality (MMVR’2001) Conference, pp. 46-52, Irvine, CA. (also see the appendix for details)

15. Wu, W., Basdogan, C., Srinivasan, M.A., 1999, Visual, Haptic, and Bimodal Perception of Size and Stiffness in Virtual Environments, the Winter Annual Meeting of ASME 99, DSC-Vol.67, pp. 19-26, Nashville, TN, November 14-19.

14. Srinivasan M.A, Basdogan C., Ho C., 1999, Haptic Interactions in Virtual Worlds: Progress and Prospects, Proceedings of the International Conference on Smart Materials, Structures, and Systems, Indian Institute of Science, Bangalore, India, July.

13. Basdogan, C., Ho, C., Srinivasan, M.A., 1999, “Simulation of Tissue Cutting and Bleeding for Laparoscopic Surgery Using Auxiliary Surfaces“, Proceedings of the Medicine Meets Virtual Reality (MMVR’7) Conference, pp. 38-44, San Francisco, CA, Jan. 19-22.

12. Basdogan C., Ho, C., Slater, M., Srinivasan, 1998, The Role of Haptic Communication in Shared Virtual Environments, Proceedings of the Third PHANToM Users Group Workshop, Dedham, MA, Oct. 3-4.

11. Ho, C., Basdogan, C., Slater, M., Durlach, N., Srinivasan, M.A. (1998). An Experiment on The Influence of Haptic Communication on the Sense of Being Together, British Telecom Workshop on Presence in Shared Virtual Environments, Ipswich, June 10-11, http://www.cs.ucl.ac.uk/staff/m.slater/BTWorkshop/touchexp.html

10. Basdogan C., Ho, C., Srinivasan, M.A., Small, S., Dawson, S., 1998, “Force interactions in laparoscopic simulations: haptic rendering of soft tissues” Medicine Meets Virtual Reality (MMVR 6) Conference, pp. 385-391, San Diego, CA, January 19-22.

9. Basdogan, C., Ho, C., Srinivasan, M.A., 1997, “A Ray-Based Haptic Rendering Technique for Displaying Shape and Texture of 3D Objects in Virtual Environments “, the Winter Annual Meeting of ASME 97, DSC-Vol. 61, pp. 77-84, Dallas, TX, Nov. 16-21.

8. Ho, C., Basdogan, C., Srinivasan, M.A., 1997, Haptic Rendering: Point – and Ray – Based Interactions, Proceedings of the Second PHANToM Users Group Workshop, Dedham, MA, Oct. 20-21 (see also MIT Artificial Intelligence Technical Report 1617, December 1997, http://www.ai.mit.edu/publications)

7. Basdogan C., Loan J.P., Rosen J.M., Delp S.L., 1996, “An interactive model of the human lower limb for simulation of surgical procedures in virtual environments”, the Winter Annual Meeting of ASME 96, BED-Vol. 33, pp. 439-440, Nov. 17-22, Atlanta.

6. Basdogan C., Amirouche F.M.L., 1996, “Nonlinear dynamics of human locomotion: From the perspective of dynamical system theory”, 3rd Biennial Joint Conference on Engineering Design and Analysis (ESDA) Bioengineering Symposium, Montpellier, France, July 1-4, Vol. 77, No. 5, pp. 163-168.

5. Rosen J.M., Laub D.R., Pieper S.D., Mecinski A., Soltanian H., McKenna M., Chen D., Delp S.L., Loan P., Basdogan C., 1996, “Virtual reality and medicine: from training systems to performance machines”, Proceedings of IEEE Virtual Reality Annual International Symposium (VRAIS 96), (Invited paper), pp. 5-13, San Francisco, CA.

4. Delp SL, Loan JP, Basdogan C, Buchanan TS, Rosen JM, 1996, Surgical simulation: An emerging technology for military medical training, Proceedings of the National Forum: Military Telemedicine On-Line Today, IEEE Press, pp. 29-34,

3. McDonald P.V., Bloomberg J.J., Layne C.S., Basdogan C., 1995, “The effects of space flight on head movement control and lower limb coordination: Lower limb kinematics”, 3rd International Symposium on the Head/Neck System, Vail, Colorado, July 2-6.

2. Amirouche F.M.L., Basdogan C., 1995, “Dynamics of a five-link bipedal locomotion model”, Winter Annual Meeting of ASME, San Francisco, pp. 33-35.

1. Basdogan C., Carollo J., 1993, “Variability of physiologic cost index during free and forced walking.”, Proceedings of IEEE Twelfth Southern Biomedical Conference, New Orleans, pp. 25-28.

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